Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1247270	1247334	65	3 [1]	[1] 3	dhaR	dihydroxyacetone kinase operon transcriptional regulator DhaR

CTCAAACACGTAGAAGCAACCTTTGAAAGCCAGCACCAGTTTATTGATGCGGTGATAACCCTTAAACCGATAATAGAAACGCAGGGAACC  >  NZ_CP009273/1247323‑1247412             |                                                                              cTCAAACACGTAGAAGCAACCTTTGAAAGCCAGCACCAGTTTATTGATGCGGTGATAACCCTTAAACCGATAATAGAAACGCAGGGAAcc  >  2:107236/1‑90 (MQ=255)             gAAGCAACCTTTGAAAGCCAGCACCAGTTTATTGATGc                                          >  1:110666/1‑38 (MQ=255)             gAAGCAACCTTTGAAAGCCAGCACCAGTTTATTGATGc                                          <  2:110666/38‑1 (MQ=255)             |                                                                              CTCAAACACGTAGAAGCAACCTTTGAAAGCCAGCACCAGTTTATTGATGCGGTGATAACCCTTAAACCGATAATAGAAACGCAGGGAACC  >  NZ_CP009273/1247323‑1247412

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑