Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1271272	1271279	8	3 [1]	[0] 3	narL	two‑component system response regulator NarL

ACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGA  >  NZ_CP009273/1271280‑1271369 |                                                                                          aCTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCg                                                   <  1:308146/41‑1 (MQ=255) aCTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCg                                                   >  2:308146/1‑41 (MQ=255) aCTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGa  >  2:185345/1‑90 (MQ=255) |                                                                                          ACTCATGGGTATCTCCTTGGACGTCTGTGAAAGTTTTTTCGGGAATAAAGGTGACCACCACTTCGGTGCCACCTGATTCACGACGGCGGA  >  NZ_CP009273/1271280‑1271369

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑