Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3280615	3280651	37	3 [1]	[0] 2	agaI/yraH	galactosamine‑6‑phosphate isomerase/fimbrial protein

ATATAAATATAATCTTAAAGTTCAGTCTATTTAATGTTCAAT  >  NZ_CP009273/3280652‑3280693 |                                          atataaatataaTCTTAAAGTTCAGTCTATTTAATGTTCAAt  >  1:271692/1‑42 (MQ=255) atataaatataaTCTTAAAGTTCAGTCTATTTAATGTTCAAt  <  2:271692/42‑1 (MQ=255) |                                          ATATAAATATAATCTTAAAGTTCAGTCTATTTAATGTTCAAT  >  NZ_CP009273/3280652‑3280693

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑