Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1974578	1974586	9	3 [1]	[0] 2	otsA	alpha,alpha‑trehalose‑phosphate synthase

TCAGGTTAGAAAGACAATCCAGGAACGCCAGACGATCGTTTTCTGTCTGGAAACCCAGCAAATCATAATCACAAAGCTGTTCAAGCAAGG  >  NZ_CP009273/1974490‑1974579                                                                                        |   tCAGGTTAGAAAGACAATCCAGGAACGCCAGACGATCGTTTTCTGTCTGGAAACCCAGCAAATCATAATCACAAAGCTGTTCAAGCAAgg  <  2:42619/90‑1 (MQ=255)                      ggAACGCCAGACGATCGTTTTCTGTCTGGAAACCCAGCAAATCATAATCACAAAGCTGTTcaagcaa    <  1:181262/67‑1 (MQ=255)                      ggAACGCCAGACGATCGTTTTCTGTCTGGAAACCCAGCAAATCATAATCACAAAGCTGTTcaagcaa    >  2:181262/1‑67 (MQ=255)                                                                                        |   TCAGGTTAGAAAGACAATCCAGGAACGCCAGACGATCGTTTTCTGTCTGGAAACCCAGCAAATCATAATCACAAAGCTGTTCAAGCAAGG  >  NZ_CP009273/1974490‑1974579

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑