Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3411524	3411534	11	2 [0]	[1] 3	acrF/BW25113_RS16940	multidrug efflux RND transporter permease subunit AcrF/membrane protein

TTTAAAGGATAAATCAGAAACATAAAGGCGCTTTCGGGT  >  NZ_CP009273/3411485‑3411523                                       | tttAAAGGATAAATCAGAAACATAAAGGCGCTTTCGGGt  <  1:250229/39‑1 (MQ=255) tttAAAGGATAAATCAGAAACATAAAGGCGCTTTCGGGt  >  2:250229/1‑39 (MQ=255)                                       | TTTAAAGGATAAATCAGAAACATAAAGGCGCTTTCGGGT  >  NZ_CP009273/3411485‑3411523

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑