Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1236897	1236957	61	2 [1]	[1] 2	cvrA	potassium/proton antiporter

GCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGT  >  NZ_CP009273/1236807‑1236901                                                                                          |      gcgcAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCAttt       >  1:101532/1‑90 (MQ=255)      gtagtTAATGAGAAAATAAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCagt  <  2:39207/90‑1 (MQ=255)                                                                                          |      GCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGT  >  NZ_CP009273/1236807‑1236901

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑