Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1315012	1315055	44	2 [1]	[0] 2	trpD	bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD

GCTCTAGTTTCTGCTGCGCCCAGGCCAGCGTTTGTTCCAGCAGGCGAGCGCCCT  >  NZ_CP009273/1315056‑1315109 |                                                      gctCTAGTTTCTGCTGCGCCCAGGCCAGCGTTTGTTCCAGCAGGCGAGCGCCCt  <  1:297186/54‑1 (MQ=255) gctCTAGTTTCTGCTGCGCCCAGGCCAGCGTTTGTTCCAGCAGGCGAGCGCCCt  >  2:297186/1‑54 (MQ=255) |                                                      GCTCTAGTTTCTGCTGCGCCCAGGCCAGCGTTTGTTCCAGCAGGCGAGCGCCCT  >  NZ_CP009273/1315056‑1315109

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑