Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1577738	1577740	3	5 [0]	[1] 2	ydeO	acid stress response transcriptional regulator YdeO

GTCTGGATGTTAGTGCATTGTAGATATTTTTTAATGGTATTTTCAGTAAATCCGATCTCTTTAAAATGCCGCTCATAAGGTTCAAAATGCGT  >  NZ_CP009273/1577739‑1577830   |                                                                                          gTCTGGATGTTAGTGCATTGTAGATATTTTTTAATGGTATTTTCAGTAAATCCGATCTCTTTAAAATGCCGCTCATAAGGTTCAAAATGc    >  1:318499/1‑90 (MQ=255)   cTGGATGTTAGTGCATTGTAGATATTTTTTAATGGTATTTTCAGTAAATCCGATCTCTTTAAAATGCCGCTCATAAGGTTCAAAATGCGt  >  1:279548/1‑90 (MQ=255)   |                                                                                          GTCTGGATGTTAGTGCATTGTAGATATTTTTTAATGGTATTTTCAGTAAATCCGATCTCTTTAAAATGCCGCTCATAAGGTTCAAAATGCGT  >  NZ_CP009273/1577739‑1577830

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑