Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	4240765	4240800	36	2 [1]	[0] 2	BW25113_RS20970	SopA family protein

ACGGAACGAAAAAATCATGCAATAAATATGTTTCGTGAAGTCTCAATCA  >  NZ_CP009273/4240801‑4240849 |                                                 acGGAACGAAAAAATCATGCAATAAATATGTTTCGTGAAGTCTCAATCa  >  1:367157/1‑49 (MQ=255) acGGAACGAAAAAATCATGCAATAAATATGTTTCGTGAAGTCTCAATCa  <  2:367157/49‑1 (MQ=255) |                                                 ACGGAACGAAAAAATCATGCAATAAATATGTTTCGTGAAGTCTCAATCA  >  NZ_CP009273/4240801‑4240849

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑