Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1240566	1240653	88	3 [1]	[1] 2	[BW25113_RS06225]	[BW25113_RS06225]

CAGTCAGGCGTTAAAAATGGGGCGGATAGTGAGGCGGTTTTGGCTGCGCTTATTGAACATTTAGAATTGATCAATCCTTCTGGCAGATTAAGCCA  >  NZ_CP009273/1240649‑1240743      |                                                                                          cAGTCAGGCGTTAAAAATGGGGCGGATAGTGAGGCGGTTTTGGCTGCGCTTTTTGAAAATTTAGAAATGATCAATCCTTCTGGCAGATTa       >  1:133499/1‑90 (MQ=255)      aGGCGTTAAAAATGGGGCGGATAGTGAGGCGGTTTTGGGTGCGCTTTTTGAAAATTTAGAATTGATTAAACCTTCTGGCAGATTAAGCCa  >  1:79212/1‑90 (MQ=255)      |                                                                                          CAGTCAGGCGTTAAAAATGGGGCGGATAGTGAGGCGGTTTTGGCTGCGCTTATTGAACATTTAGAATTGATCAATCCTTCTGGCAGATTAAGCCA  >  NZ_CP009273/1240649‑1240743

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑