Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2001095	2001105	11	2 [0]	[0] 3	amyA	alpha‑amylase

GAGTAGTGACCGACGAAAACGGCGAAGCAACCTTCTTTTGCAACGGCGGCAGCGTC  >  NZ_CP009273/2001039‑2001094                                                        | gagTAGTGACCGACGAAAACGGCGAAGCAACCTTCTTTTGCAACGGCGGcagcgtc  <  1:56822/56‑1 (MQ=255) gagTAGTGACCGACGAAAACGGCGAAGCAACCTTCTTTTGCAACGGCGGcagcgtc  >  2:56822/1‑56 (MQ=255)                                                        | GAGTAGTGACCGACGAAAACGGCGAAGCAACCTTCTTTTGCAACGGCGGCAGCGTC  >  NZ_CP009273/2001039‑2001094

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑