Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1164381	1164451	71	3 [1]	[1] 3	comR/bhsA	TetR family copper‑responsive transcriptional repressor ComR/multiple stress resistance protein BhsA

GATCCAGATCACATCTATCATTTAGTTATCGATCGTTAAGTAATTGCTTGCGACGTCATTCATCTGCATAAGGCCACTATTATGAAAAAC  >  NZ_CP009273/1164448‑1164537     |                                                                                      gATCCAGATCACATCTATCATTTAGTTATCGATCGTTAAGTAATTGCTTGCGACGTCATTCATCTGCATAAGGCCACTATTATGAAAAAc  >  2:221267/1‑90 (MQ=255)     cAGATCACATCTATCATTTAGTTATCGATCGTTAAGTAATTGCTTGCGACGtcat                                 <  1:169640/55‑1 (MQ=255)     cAGATCACATCTATCATTTAGTTATCGATCGTTAAGTAATTGCTTGCGACGtcat                                 >  2:169640/1‑55 (MQ=255)     |                                                                                      GATCCAGATCACATCTATCATTTAGTTATCGATCGTTAAGTAATTGCTTGCGACGTCATTCATCTGCATAAGGCCACTATTATGAAAAAC  >  NZ_CP009273/1164448‑1164537

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑