Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2779433	2779449	17	4 [0]	[0] 2	BW25113_RS13825/BW25113_RS26005	tRNA‑Ile/alpha‑amylase family glycosyl hydrolase

GATACTCGCAGTCAACAAGCAAATGTTAATAATTAGCACTATCTATAGTTATCATCGATTCAATGATACTTTGTAATGATTTTGTATCTA  >  NZ_CP009273/2779343‑2779432                                                                                          | gATACTCGCAGTCAACAAGCAAATGTTAATAATTAGCACTATCTATAGTTATCATCGATTCAATGATACTTTGTAATGGTTTTGTATCta  <  2:368225/90‑1 (MQ=255) gATACTCGCAGTCAACAAGCAAATGTTAATAATTAGCACTATCTATAGTTATCATCGATTCAATGATACTTTGTAATGATTTTGTATCta  <  1:189638/90‑1 (MQ=255)                                                     catcGATTCAATGATACTTTGTAATGATTTTGTATCta  >  1:227629/1‑38 (MQ=255)                                                     catcGATTCAATGATACTTTGTAATGATTTTGTATCta  <  2:227629/38‑1 (MQ=255)                                                                                          | GATACTCGCAGTCAACAAGCAAATGTTAATAATTAGCACTATCTATAGTTATCATCGATTCAATGATACTTTGTAATGATTTTGTATCTA  >  NZ_CP009273/2779343‑2779432

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑