Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3576442	3576452	11	3 [0]	[1] 3	BW25113_RS17825	YrhA family protein

CTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCAAATAAATAAATTAATAAAAATGATGAA  >  NZ_CP009273/3576352‑3576441                                                                                          | cTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCAAATAAATAAATTAATAAAAATGatgaa  <  1:338439/90‑1 (MQ=255) cTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCAAATAAATAAATTAATAAAAATGatgaa  <  2:236792/90‑1 (MQ=255) cTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCAAATAAATAAATTAATAAAAATGatgaa  <  2:267618/90‑1 (MQ=255)                                                                                          | CTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCAAATAAATAAATTAATAAAAATGATGAA  >  NZ_CP009273/3576352‑3576441

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑