Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1539254	1539318	65	2 [1]	[1] 2	BW25113_RS07710	leucine‑rich repeat domain‑containing protein

GGTTGTTAGCAGCGTTTAATGTCTGAACATTGCAGAAGTTGCTATAGAATATTTTAATTTCAGAAAGCAAATTGTTGTTAATAAGTAACGTATTCAAGTTGGGAAATAAGTCATTGTGTAAACTTGTT  >  NZ_CP009273/1539164‑1539291                                                                                          |                                       ggTTGTTAGCAGCGTTTAATGTCTGAACATTGCAGAAGTTGCTATAGAATATTTTAATTTCAGAAAGCAAATTGTTGTTAATAAGTAACg                                        >  2:81491/1‑90 (MQ=255)                                       ttGCTATAGAATATTTTAATTTCAGAAAGCAAATTGTTGTTAATAAGTAACGTATTCAAGTTGGGAAATAAGTCATTGTGTAAACTTGtt  <  2:158467/90‑1 (MQ=255)                                                                                          |                                       GGTTGTTAGCAGCGTTTAATGTCTGAACATTGCAGAAGTTGCTATAGAATATTTTAATTTCAGAAAGCAAATTGTTGTTAATAAGTAACGTATTCAAGTTGGGAAATAAGTCATTGTGTAAACTTGTT  >  NZ_CP009273/1539164‑1539291

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑