Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1995335	1995372	38	3 [1]	[1] 2	fliA/fliC	RNA polymerase sigma factor FliA/H48 family flagellin FliC

TTCAGCGGTATAGAGTGAATTCACGATAAACAGCCCTGCGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGG  >  NZ_CP009273/1995247‑1995336                                                                                        |   ttCAGCGGTATAGAGTGAATTCACGATAAACAGCCCTGCGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCgg  >  2:170379/1‑90 (MQ=255)                                                     tCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATc    <  1:31745/36‑1 (MQ=255)                                                     tCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATc    >  2:31745/1‑36 (MQ=255)                                                                                        |   TTCAGCGGTATAGAGTGAATTCACGATAAACAGCCCTGCGTTATATGAGTTATCGGCATGATTATCCGTTTCTGCAGGGTTTTTAATCGG  >  NZ_CP009273/1995247‑1995336

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑