Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2016528	2016558	31	2 [1]	[1] 2	fliR	flagellar biosynthetic protein FliR

GCGTGCTGGCGCTGATCTCCACCGCGCCGATTCTGAGCGAACGCAGCGTACCGAAACGGGTAAAACTGGGTCTGGCAATGATGATCACGTTCGCCATTGCCC  >  NZ_CP009273/2016438‑2016539                                                                                          |             gcgTGCTGGCGCTGATCACCACCGCGCCGATTCTGAGCGAACGCAGCGTACCGAAACGGGTAAAACTGGGTCTGGCAATGATGATCACGt              >  2:273278/1‑90 (MQ=255)             tGATCTCCACCGCGCCGATTCTGAGCGAACGCAGCGTACCGAAACGGGTAAAACTGGGTCTGGCAATGATGATCACGTTCGCCATTGccc  <  2:11242/90‑1 (MQ=255)                                                                                          |             GCGTGCTGGCGCTGATCTCCACCGCGCCGATTCTGAGCGAACGCAGCGTACCGAAACGGGTAAAACTGGGTCTGGCAATGATGATCACGTTCGCCATTGCCC  >  NZ_CP009273/2016438‑2016539

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑