Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1806946	1807137	192	3 [1]	[1] 3	BW25113_RS09050	hypothetical protein

TAACATTGTCCTGCAGATATGTATCAAAACTAAGTGCTGGCGCTCCTGGCTTTGAGGCATCATAGTTAATGTTAGACATATAGGCAATCA  >  NZ_CP009273/1807131‑1807220        |                                                                                   tAACATTGTCCTGCAGATATGTATCAAAACTAAGTGCTGGCGCTCCTGGCTTTGAGGCATCATAGTTAATGTTAGACATATAGGCAATCa  >  1:27175/1‑90 (MQ=255)        gTCCTGCAGATATGTATCAAAACTAAGTGCTGGCGCTCCTGGCTTTGAGGCATCATAGtt                         <  1:99107/60‑1 (MQ=255)        gTCCTGCAGATATGTATCAAAACTAAGTGCTGGCGCTCCTGGCTTTGAGGCATCATAGtt                         >  2:99107/1‑60 (MQ=255)        |                                                                                   TAACATTGTCCTGCAGATATGTATCAAAACTAAGTGCTGGCGCTCCTGGCTTTGAGGCATCATAGTTAATGTTAGACATATAGGCAATCA  >  NZ_CP009273/1807131‑1807220

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑