Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2088582	2088621	40	3 [1]	[1] 2	[hisH]–[hisA]	[hisH],[hisA]

GATGTGATGATTATTCCGGCATTAGATTTAATCGACGGCACTGTGGTGCGTCTCCATCAGGGCGATTACGGCAAACAGCGCGATTACGGTAACGACCCGCTGCCGCGATTGC  >  NZ_CP009273/2088600‑2088711                       |                                                                                          gaTGTGATGATTATTCCGGCATTAGATTTAATCGACGGCACTGTGGTGCGTCTCCATCAGGGCGATTACGGCAAACAGCGCGATTACGGt                        >  2:187376/1‑90 (MQ=255)                       tAGATTTAATCGACGGCACTGTGGTGCGTCTCCATCAGGGCGATTACGGCAAACAGCGCGATTACGGTAACGACCCGCTGCCGCGATTGc  <  1:279664/90‑1 (MQ=255)                       |                                                                                          GATGTGATGATTATTCCGGCATTAGATTTAATCGACGGCACTGTGGTGCGTCTCCATCAGGGCGATTACGGCAAACAGCGCGATTACGGTAACGACCCGCTGCCGCGATTGC  >  NZ_CP009273/2088600‑2088711

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑