Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2206132	2206174	43	3 [1]	[0] 2	btsR	two‑component system response regulator BtsR

TTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGA  >  NZ_CP009273/2206175‑2206223 |                                                 tttAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGa  <  1:148825/49‑1 (MQ=255) tttAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGa  >  2:148825/1‑49 (MQ=255) |                                                 TTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGA  >  NZ_CP009273/2206175‑2206223

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑