Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2227236	2227264	29	2 [1]	[0] 2	yeiS	DUF2542 family protein

GGCTTCGGAATTTTATCTATCGGCATGATTGTTTATCTTA  >  NZ_CP009273/2227265‑2227304 |                                        ggCTTCGGAATTTTATCTATCGGCATGATTGTTTATCTTa  <  1:320227/40‑1 (MQ=255) ggCTTCGGAATTTTATCTATCGGCATGATTGTTTATCTTa  >  2:320227/1‑40 (MQ=255) |                                        GGCTTCGGAATTTTATCTATCGGCATGATTGTTTATCTTA  >  NZ_CP009273/2227265‑2227304

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑