Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3796115	3796133	19	2 [0]	[1] 2	waaO	lipopolysaccharide 3‑alpha‑galactosyltransferase

AGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGCCAGGGCATCAAAATACTTACGATCATCATCACCAAAATAATC  >  NZ_CP009273/3796116‑3796223                   |                                                                                          aGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGCCAGGGCATCAAAATACTTACGatc                    >  1:212225/1‑90 (MQ=255)                   aTCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGCCAGGGCATCAAAATACTTACGATCATCATCACCAAAATAATc  <  1:115238/90‑1 (MQ=255)                   |                                                                                          AGGCAATGAGCGCAGTCGATCACCATTAATCAGATATATTTTAATTCTGGTTTTATACTGCAACGCCAGGGCATCAAAATACTTACGATCATCATCACCAAAATAATC  >  NZ_CP009273/3796116‑3796223

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑