Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	4466649	4466652	4	2 [0]	[0] 2	BW25113_RS22080	hypothetical protein

TATTTGATAATGTTGAGTCTATATTTAATGAAGTACCTGTCAG  >  NZ_CP009273/4466653‑4466695 |                                           tATTTGATAATGTTGAGTCTATATTTAATGAAGTACCTGTCAg  >  1:220399/1‑43 (MQ=255) tATTTGATAATGTTGAGTCTATATTTAATGAAGTACCTGTCAg  <  2:220399/43‑1 (MQ=255) |                                           TATTTGATAATGTTGAGTCTATATTTAATGAAGTACCTGTCAG  >  NZ_CP009273/4466653‑4466695

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑