Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1114874	1114893	20	2 [1]	[1] 3	[BW25113_RS05515]	[BW25113_RS05515]

GTAAAAACGGCCTCATTCTGGAGGCCGTAATGATGATTATTGGAAGCGGGAAAGCCTGAATGGCGTCAAATCAAAATCGCTTTTTTTGTC  >  NZ_CP009273/1114888‑1114977       |                                                                                    gTAAAAACGGCCTCATTCTGGAGGCCGTAATGATGATTATTGGAAGCGGGAAAGCCTGAATGGCGTCAAATCAAAATCGCTTTTTTTGTc  >  1:228570/1‑90 (MQ=255)       aCGGCCTCATTCTGGAGGCCGTAATGATGATTATTGGAAg                                              <  1:20704/40‑1 (MQ=255)       aCGGCCTCATTCTGGAGGCCGTAATGATGATTATTGGAAg                                              >  2:20704/1‑40 (MQ=255)       |                                                                                    GTAAAAACGGCCTCATTCTGGAGGCCGTAATGATGATTATTGGAAGCGGGAAAGCCTGAATGGCGTCAAATCAAAATCGCTTTTTTTGTC  >  NZ_CP009273/1114888‑1114977

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑