Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1068088	1068116	29	2 [1]	[1] 3	rutB	peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB

ATTTCCCCTGCAGCTGCGGCTGCTTACGCATGGTTTTCAGGGCGTTCGATTTATGAAAATTCGGTGAGCCGGGTCCGCCAGCCTCGACATACTGTTCAT  >  NZ_CP009273/1067998‑1068096                                                                                          |          aTTTCCCCTGCAGCTGCGGCGGCTTACGCATGGTTTTCAGGGCGTTCGATTTATGAAAATTCGGTGAGCCGGGTCCGCCAGCCTCGACAt           <  2:265824/90‑1 (MQ=255)          gCAGCTGCGGCTGCTTACGCATGGTTTTCAGGGCGTTCGATTTATGAAAATTCGGTGAGCCGGGTCCGCCAGCCTCGACATACTGTTCAt  >  2:267234/1‑90 (MQ=255)                                                                                          |          ATTTCCCCTGCAGCTGCGGCTGCTTACGCATGGTTTTCAGGGCGTTCGATTTATGAAAATTCGGTGAGCCGGGTCCGCCAGCCTCGACATACTGTTCAT  >  NZ_CP009273/1067998‑1068096

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑