Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1123518	1123573	56	2 [1]	[1] 2	murJ	murein biosynthesis integral membrane protein MurJ

TTAAACTTCCTAACTTGTTACGCCGTATCTTTGCCGAAGGGGCATTTTCCCAGGCATTTGTACCGATTCTGGCGGAATATAAAAGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTAT  >  NZ_CP009273/1123428‑1123552                                                                                          |                                    ttAAACTTCCTAACTTGTTACGCCGTATCTTTGCCGAAGGGGCATTTTCCCAGGCATTTGTACCGATTCTGGCGTAATATAAAAGTAAGc                                     <  2:222244/90‑1 (MQ=255)                                    gAAGGGGCATTTTCCCAGGCATTTGTACCGATTCTGGCGGAATATAAAAGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTAt  <  1:207945/90‑1 (MQ=255)                                                                                          |                                    TTAAACTTCCTAACTTGTTACGCCGTATCTTTGCCGAAGGGGCATTTTCCCAGGCATTTGTACCGATTCTGGCGGAATATAAAAGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTAT  >  NZ_CP009273/1123428‑1123552

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑