Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1188621	1188647	27	2 [1]	[1] 2	mnmA	tRNA 2‑thiouridine(34) synthase MnmA

CTGGTGCTCACCAATTTCATCGCCATCGACGGTAATGATTTTGCCCGGTTGCGCCGGGAGATAACGGCCCAGGAACTCGCGGAATTTACGTTCGCCAATGAAG  >  NZ_CP009273/1188531‑1188633                                                                                          |              cTGGTGCTCACCAATTTCATCGCCATCGACGGTAATGATTTTGCCCGGTTGCGCCGGGAGATAACGGCCCAGGAACTCGCGGAATTTACg               >  1:144348/1‑90 (MQ=255)              aTTTCATCGCCATCGACGGTAATGATTTTGCCCGGTTGCGCCGGGAGATAACGGCCCAGGAACTCGCGGAATTTACGTTCGCCAATGAAg  >  1:268952/1‑90 (MQ=255)                                                                                          |              CTGGTGCTCACCAATTTCATCGCCATCGACGGTAATGATTTTGCCCGGTTGCGCCGGGAGATAACGGCCCAGGAACTCGCGGAATTTACGTTCGCCAATGAAG  >  NZ_CP009273/1188531‑1188633

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑