Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NZ_CP009273 2145186 2145230 45 2 [1] [1] 2 [pphC] [pphC]

CCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGGTTGAATTGTTGTCTTCAACCGCCATGAGAAACTCACTCTG  >  NZ_CP009273/2145096‑2145199
                                                                                         |              
ccGACGAGCTAAGAGAAAATTTATTTCGCTAACCAGCCGTTATATTTATTTTTAAAACGGGGGGTTGAATTTTTGTCTTCAACCGCCATg                <  1:215398/90‑1 (MQ=255)
              aaaaatTTAGTTCGTTAACCAGCTTTTTTTTTTTTTTTTTAACCTGGCGGTTGATTTTTTTTCTTCACCCGCCATGAGAAACTCACTCTg  <  2:206245/88‑1 (MQ=255)
                                                                                         |              
CCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGGTTGAATTGTTGTCTTCAACCGCCATGAGAAACTCACTCTG  >  NZ_CP009273/2145096‑2145199

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: