Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2545848	2545897	50	2 [1]	[1] 3	amiA	N‑acetylmuramoyl‑L‑alanine amidase AmiA

GCTGAAAGCCGGTTTGGCTGCCCTGACGTTGTCAGGAATGTCGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGC  >  NZ_CP009273/2545758‑2545848                                                                                          |  gCTGAAAGCCGGTTTGGCTGCCCTGACGTTGTCAGGAATGTCGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAg   >  2:80255/1‑90 (MQ=255)  cTGAAAGCCGGTTTGGCTGCCCTGACGTTGTCAGGAATGTCGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGc  >  1:180305/1‑90 (MQ=255)                                                                                          |  GCTGAAAGCCGGTTTGGCTGCCCTGACGTTGTCAGGAATGTCGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGC  >  NZ_CP009273/2545758‑2545848

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑