Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1024393	1024419	27	2 [1]	[1] 2	rlmI	23S rRNA (cytosine(1962)‑C(5))‑methyltransferase RlmI

AAGTCAGGAGAATACCGCCTTCATTCAGCAGCTGAATCGCCAGCATGTTGATGTCTTTATAACCACGACACGCGCCCATCAACTGGCTTTTATTCT  >  NZ_CP009273/1024414‑1024509       |                                                                                          aaGTCAGGAGAATACCGCCTTCATTCAGCAGCTGAATCGCCAGCATGTTGATGTCTTTATAACCACGACACGCGCCCATCAACTGGCttt        >  2:17676/1‑90 (MQ=255)       ggAGAATACCGCCTTCATTCAGCAGCTGAATCGCCAGCATGTTGATGTCTTTATAACCACGACACGCGCCCATCAACTGGCTTTTATtct  >  1:240277/1‑90 (MQ=255)       |                                                                                          AAGTCAGGAGAATACCGCCTTCATTCAGCAGCTGAATCGCCAGCATGTTGATGTCTTTATAACCACGACACGCGCCCATCAACTGGCTTTTATTCT  >  NZ_CP009273/1024414‑1024509

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑