Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1189250	1189308	59	2 [0]	[1] 2	[nudJ]	[nudJ]

GCCAGTTAAAATCGCCAATCATCTCCAGCGGATAACGTTGCCCGCTTTGATAACAACGAATACTTTCCGCCACCAGCGGCGAACGAAGATTTG  >  NZ_CP009273/1189306‑1189398    |                                                                                          gCCAGTTAAAATCGCCAATCATCTCCAGCGGATAACGTTGCCCGCTTTGATAACAACGAATACTTTCCGCCACCAGCGGCGAACGAAGAt     >  1:40327/1‑90 (MQ=255)    aGTTAAAATCGCCAATCATCTCCAGCGGATAACGTTGCCCGCTTTGATAACAACGAATACTTTCCGCCACCAGCGGCGAACGAAGATTTg  >  2:64410/1‑90 (MQ=255)    |                                                                                          GCCAGTTAAAATCGCCAATCATCTCCAGCGGATAACGTTGCCCGCTTTGATAACAACGAATACTTTCCGCCACCAGCGGCGAACGAAGATTTG  >  NZ_CP009273/1189306‑1189398

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑