Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1392050	1392087	38	3 [1]	[1] 3	uspE	universal stress protein UspE

AGAACCACAATCCCCGCCTGTAAGTGCTCCGCCAAATCAGGAATCACCTCTTCTGGCAGACCTTTTTCTACGTGCGTCATGTTTTCATTA  >  NZ_CP009273/1392077‑1392166            |                                                                               aGACCCACACCCCCCGCCTGTAAGTGCTCCGCCAAATCAGGAATCACCTCTTCTGGCAGACCTTTTTCTACGTGCGTCATGTTTTCATTa  <  2:63397/90‑1 (MQ=255)            ccccGCCTGTAAGTGCTCCGCCAAATCAGGAATCACCTCTTCTGGCa                                  >  1:166074/1‑47 (MQ=255)            ccccGCCTGTAAGTGCTCCGCCAAATCAGGAATCACCTCTTCTGGCa                                  <  2:166074/47‑1 (MQ=255)            |                                                                               AGAACCACAATCCCCGCCTGTAAGTGCTCCGCCAAATCAGGAATCACCTCTTCTGGCAGACCTTTTTCTACGTGCGTCATGTTTTCATTA  >  NZ_CP009273/1392077‑1392166

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑