Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1591850	1591860	11	2 [1]	[0] 3	BW25113_RS07915	ECSE_1600 family autotransporter

GCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTCCGCTATC  >  NZ_CP009273/1591861‑1591950 |                                                                                          gCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTccc                                                  <  1:252362/42‑1 (MQ=255) gCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTccc                                                  >  2:252362/1‑42 (MQ=255) gCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTCCGCTATc  >  2:173154/1‑90 (MQ=255) |                                                                                          GCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGGCCTTGCATTATTTCCGCTATC  >  NZ_CP009273/1591861‑1591950

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑