Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1677486	1677520	35	2 [0]	[1] 3	rstB	two‑component system sensor histidine kinase RstB

GGCAGTTGGTCCTGTTCCTTATCTTTATTATCTCCATCAGATGCGATTGCTGGATATCGCCCTGATCGCTTTTATTGCTATTTCCCTCGC  >  NZ_CP009273/1677498‑1677587                        |                                                                   ggCAGTTGGTCCTGTTCCTTATCTTTATTATCTCCATCAGATGCGATTGCTGGATATCGCCCTGATCGCTTTTATTGCTATTTCCCTCGc  <  1:15340/90‑1 (MQ=255)                        tttATTATCTCCATCAGATGCGATTGCTGGATATCGCCCTGATCGCTTTTATTGCTa            <  1:207289/57‑1 (MQ=255)                        tttATTATCTCCATCAGATGCGATTGCTGGATATCGCCCTGATCGCTTTTATTGCTa            >  2:207289/1‑57 (MQ=255)                        |                                                                   GGCAGTTGGTCCTGTTCCTTATCTTTATTATCTCCATCAGATGCGATTGCTGGATATCGCCCTGATCGCTTTTATTGCTATTTCCCTCGC  >  NZ_CP009273/1677498‑1677587

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑