Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1704806	1704815	10	2 [1]	[0] 2	rsxG	electron transport complex subunit RsxG

CGCGCGTGACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCACCCATTTTGCGGGTAAAA  >  NZ_CP009273/1704816‑1704905 |                                                                                          cgcgcgTGACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCACCCATTTTGCGGGTaaaa  >  1:272141/1‑90 (MQ=255) cgcgcgTGACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCACCCATTTTGCGGGTaaaa  >  2:185356/1‑90 (MQ=255) |                                                                                          CGCGCGTGACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCACCCATTTTGCGGGTAAAA  >  NZ_CP009273/1704816‑1704905

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑