Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1778080	1778116	37	2 [0]	[1] 3	fadK	medium‑chain fatty‑acid‑‑CoA ligase

CAGCGTTGCACCTGTATGCTCGGCGCAACGCCGTTTGTCTATGATCTTTTGAATGTACTAGAGAAACAACCCGCGGACCTTTCAGCGCTGCGTT  >  NZ_CP009273/1778113‑1778206     |                                                                                          cagcGTTGCACCTGTATGCTCGGCGCAACGCCGTTTGTCTATGATCTTTTGAATGTACTAGAGAAACAACCCGCGGACCTTTCAGCGCTg      >  2:265581/1‑90 (MQ=255)     gTTGCACCTGTATGCTCGGCGCAACGCCGTTTGTCTATGATCTTTTGAATGTACTAGAGAAACAACCCGCGGACCTTTCAGCGCTGCGtt  >  1:12881/1‑90 (MQ=255)     gTTGCACCTGTATGCTCGGCGCAACGCCGTTTGTCTATGATCTTTTGAATGTACTAGAGAAACAACCCGCGGACCTTTCAGCGCTGCGtt  >  1:47316/1‑90 (MQ=255)     |                                                                                          CAGCGTTGCACCTGTATGCTCGGCGCAACGCCGTTTGTCTATGATCTTTTGAATGTACTAGAGAAACAACCCGCGGACCTTTCAGCGCTGCGTT  >  NZ_CP009273/1778113‑1778206

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑