Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2100329	2100343	15	2 [0]	[0] 2	wzy	O16 family O‑antigen polymerase

CGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTA  >  NZ_CP009273/2100344‑2100433 |                                                                                          cGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTa  <  2:235801/90‑1 (MQ=255) cGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTa  <  2:256540/90‑1 (MQ=255) |                                                                                          CGAACTGGTAGTTACTTAACCTCATGCATATATATATCATCGAAAAAGAAATAACTAACAAGCCTACATTATGCACTTTCTTCGATGGTA  >  NZ_CP009273/2100344‑2100433

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑