Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2539150	2539157	8	3 [1]	[0] 2	murQ	N‑acetylmuramic acid 6‑phosphate etherase

AGGCTCGAACACCGCCTCGGCTGAAATTGACCGCGTATCGAC  >  NZ_CP009273/2539158‑2539199 |                                          aGGCTCGAACACCGCCTCGGCTGAAATTGACCGCGTATCGAc  >  1:107882/1‑42 (MQ=255) aGGCTCGAACACCGCCTCGGCTGAAATTGACCGCGTATCGAc  <  2:107882/42‑1 (MQ=255) |                                          AGGCTCGAACACCGCCTCGGCTGAAATTGACCGCGTATCGAC  >  NZ_CP009273/2539158‑2539199

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑