Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2823585	2823589	5	2 [0]	[0] 4	gutQ	arabinose‑5‑phosphate isomerase GutQ

TCTCCGTAGAACGCGAAGCCTGCCCGATGCACCTTGCGCCGACCTCCAGCACC  >  NZ_CP009273/2823590‑2823642 |                                                     tctcCGTAGAACGCGAAGCCTGCCCGATGCACCTTGCGCCGACCTCCAGCAcc  <  1:77357/53‑1 (MQ=255) tctcCGTAGAACGCGAAGCCTGCCCGATGCACCTTGCGCCGACCTCCAGCAcc  >  2:77357/1‑53 (MQ=255) tctcCGTAGAACGCGAAGCCTGCCCGATGCACCTTGCGCCGACCTCCAGCAc   <  1:28943/52‑1 (MQ=255) tctcCGTAGAACGCGAAGCCTGCCCGATGCACCTTGCGCCGACCTCCAGCAc   >  2:28943/1‑52 (MQ=255) |                                                     TCTCCGTAGAACGCGAAGCCTGCCCGATGCACCTTGCGCCGACCTCCAGCACC  >  NZ_CP009273/2823590‑2823642

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑