Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1524076	1524099	24	2 [1]	[1] 2	BW25113_RS07645	RHS repeat protein

GCAGGGGATAGACAAGGTCAGCCAGCTAAAGAAAGAATCATGGATCTTAAAAATAACACTGTCGGTATTGCTTGTGGCGATTTTTCTGCCA  >  NZ_CP009273/1523986‑1524076                                                                                          |  gcAGGGGATAGACAAGGTCAGCCAGCTAAAGAAAGAATCATGGATCTTAAAAATAACACTGTCGGTATTGCTTGTGGCGATTTTTCTGcc   >  1:220473/1‑90 (MQ=255)  cAGGGGATAGACAAGGTCAGCCAGCTAAAGAAAGAATCATGGATCTTAAAAATAACACTGTCGGTATTGCTTGTGGCGATTTTTCTGCCa  <  2:191763/90‑1 (MQ=255)                                                                                          |  GCAGGGGATAGACAAGGTCAGCCAGCTAAAGAAAGAATCATGGATCTTAAAAATAACACTGTCGGTATTGCTTGTGGCGATTTTTCTGCCA  >  NZ_CP009273/1523986‑1524076

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑