Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1558639	1558667	29	3 [1]	[1] 2	dosP	oxygen‑sensing cyclic‑di‑GMP phosphodiesterase

CATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGA  >  NZ_CP009273/1558562‑1558651                                                                             |              caTTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACaga  <  2:62241/90‑1 (MQ=255)                                        cgtcgtTTTCGAGGCTCACGAGGACAAACTGCGTACCt               >  1:107568/1‑38 (MQ=255)                                        cgtcgtTTTCGAGGCTCACGAGGACAAACTGCGTACCt               <  2:107568/38‑1 (MQ=255)                                                                             |              CATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGA  >  NZ_CP009273/1558562‑1558651

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑