Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2539490	2539536	47	2 [1]	[1] 3	murQ	N‑acetylmuramic acid 6‑phosphate etherase

TGAAACCGGGTCTGGTGGTTGGTTTGATTGCTGGCGGCGAATATGCCATTCAGCACGCGGTGGAAGGCGCGGAAGATAGCCGGGAAGGCGGTGTTAA  >  NZ_CP009273/2539400‑2539496                                                                                          |        tGAAACCGGGTCTGGTGGTTGGTTTGATTGCTGGCGGCGAATATGCCATTCAGCACGCGGTGGAAGGCGCGGAAGATAGCCGGGAAGGCg         <  1:185166/90‑1 (MQ=255)        gggTCTGGTGGTTGGTTTGATTGCTGGCGGCGAATATGCCATTCAGCACGCGGTGGAAGGCGCGGAAGATAGCCGGGAAGGCGGTGTTaa  <  1:3522/90‑1 (MQ=255)                                                                                          |        TGAAACCGGGTCTGGTGGTTGGTTTGATTGCTGGCGGCGAATATGCCATTCAGCACGCGGTGGAAGGCGCGGAAGATAGCCGGGAAGGCGGTGTTAA  >  NZ_CP009273/2539400‑2539496

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑