Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3371007	3371011	5	3 [0]	[1] 2	sspA/rpsI	stringent starvation protein A/30S ribosomal protein S9

AGAAAATTGGATGATAGTTTACCAGATTTTGCGACCATTGTGGTGAGTCGATGCCGGAAATGGGGAAAAAGAGATGCGCTTTAGTCTGAA  >  NZ_CP009273/3370917‑3371006                                                                                          | aGAAAATTGGATGATAGTTTACCAGATTTTGCGACCATTGTGGTGAGTCGATGCCGGAAATGGGGAAAAAGAGATGCGCTTTAGTCTGaa  >  2:6609/1‑90 (MQ=255)                                               gTCGATGCCGGAAATGGGGAAAAAGAGATGCGCTTTAGTCTGaa  >  1:302264/1‑44 (MQ=255)                                               gTCGATGCCGGAAATGGGGAAAAAGAGATGCGCTTTAGTCTGaa  <  2:302264/44‑1 (MQ=255)                                                                                          | AGAAAATTGGATGATAGTTTACCAGATTTTGCGACCATTGTGGTGAGTCGATGCCGGAAATGGGGAAAAAGAGATGCGCTTTAGTCTGAA  >  NZ_CP009273/3370917‑3371006

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑