Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1172325	1172325	1	2 [0]	[0] 2	lolD	lipoprotein‑releasing ABC transporter ATP‑binding protein LolD

GTCAGCCAATGAGCAAACTGTCGTCGGCAGCGAAAGCTGAAC  >  NZ_CP009273/1172283‑1172324                                          | gTCAGCCAATGAGCAAACTGTCGTCGGCAGCGAAAGCTGAAc  >  1:58433/1‑42 (MQ=255) gTCAGCCAATGAGCAAACTGTCGTCGGCAGCGAAAGCTGAAc  <  2:58433/42‑1 (MQ=255)                                          | GTCAGCCAATGAGCAAACTGTCGTCGGCAGCGAAAGCTGAAC  >  NZ_CP009273/1172283‑1172324

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑