Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1387435	1387467	33	2 [1]	[1] 3	pgrR/mppA	DNA‑binding transcriptional regulator PgrR/murein tripeptide ABC transporter substrate‑binding protein MppA

TCGGTTAGAGGGAAACTTATGAAGCACTCTGTTTCAGTCACGTGTTGTGCGCTGTTGGTCAGCAGCATTTCTCTTTCGTATGCTGCAGAA  >  NZ_CP009273/1387466‑1387555   |                                                                                        tCGGTTAGACGGAAACTTATTAAGCACTCTGTTTAAGCCACGTGTTGTGCGCTGTTGGTCAGAAGCATTTCTCTTTCTTATGCTGCAGaa  >  1:290977/1‑90 (MQ=255)   ggTTAGAGGGAAACTTATGAAGCACTCTGTTTCAg                                                       >  1:179525/1‑35 (MQ=255)   ggTTAGAGGGAAACTTATGAAGCACTCTGTTTCAg                                                       <  2:179525/35‑1 (MQ=255)   |                                                                                        TCGGTTAGAGGGAAACTTATGAAGCACTCTGTTTCAGTCACGTGTTGTGCGCTGTTGGTCAGCAGCATTTCTCTTTCGTATGCTGCAGAA  >  NZ_CP009273/1387466‑1387555

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑