Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	4531520	4531539	20	2 [0]	[0] 2	fimB/fimE	type 1 fimbria switch DNA invertase FimB/type 1 fimbria switch DNA invertase FimE

CTTCAAAATAAATAAACAAAATCATTCATAAATTTACACATCACTTAAAATCTCCTGTTTCCGCACTTTTTTCTTTATTTTTTAAGCAAC  >  NZ_CP009273/4531540‑4531629 |                                                                                          cttcAAAATAAATAAACAAAATCATTCATAAATTTACACATCACTTAAAATCTCCTGTTTCCGCACTTTTTTCTTTATTTTTTAAGCAAc  >  1:314828/1‑90 (MQ=255) cttcAAAATAAATAAACAAAATCATTCATAAATTTACACATCACTTAAAATCTCCTGTTTCCGCACTTTTTTCTTTATTTTTTAAGCAAc  >  2:141348/1‑90 (MQ=255) |                                                                                          CTTCAAAATAAATAAACAAAATCATTCATAAATTTACACATCACTTAAAATCTCCTGTTTCCGCACTTTTTTCTTTATTTTTTAAGCAAC  >  NZ_CP009273/4531540‑4531629

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑