Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1207819	1207841	23	2 [1]	[0] 2	BW25113_RS25985/BW25113_RS25535	protein YmgK/hypothetical protein

AATGATTTAACCTGTTCCTGGCTAAAATACATATAACCGGATGATGACTAA  >  NZ_CP009273/1207842‑1207892 |                                                   aaTGATTTAACCTGTTCCTGGCTAAAATACATATAACCGGATGATGACTaa  >  1:201656/1‑51 (MQ=255) aaTGATTTAACCTGTTCCTGGCTAAAATACATATAACCGGATGATGACTaa  <  2:201656/51‑1 (MQ=255) |                                                   AATGATTTAACCTGTTCCTGGCTAAAATACATATAACCGGATGATGACTAA  >  NZ_CP009273/1207842‑1207892

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑