| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 481,301 | (G)5→6 | coding (85/648 nt) | acrR → | multidrug efflux transporter transcriptional repressor AcrR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 481,296 | 1 | . | G | 98.6% | 277.5 / ‑3.3 | 71 | coding (80/648 nt) | acrR | multidrug efflux transporter transcriptional repressor AcrR |
| Reads supporting (aligned to +/- strand): ref base . (1/0); new base G (31/39); total (32/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.51e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01 | |||||||||||
TCACGAACATATGGCACGAAAAACCAAACAAGAAGCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCA‑GGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCTACTGGCATTTTAAAGACAA > NZ_CP009273/481207‑481380 | tCACGAACATATGGCACGAAAAACCAAACAAGAAGCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCAcagca > 2:381222/1‑90 (MQ=255) cACGGACATATGGCACGAAAAACCAAACAAGAAGCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCAcagca‑g < 1:2664490/90‑1 (MQ=255) cACGAACATATGGCACGAAAAACCAAACAAGAAGCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCAcagca‑g < 2:2620720/90‑1 (MQ=255) cACGAACATATGGCACGAAAAACCAAACAAGAAGCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCAcagca‑g > 1:2944356/1‑90 (MQ=255) cACGAACATATGGCACGAAAAACCAAACAAGAAGCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCAcagca‑g < 2:640435/90‑1 (MQ=255) cACGAACATATGGCACGAAAAACCAAACAAGAAGCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCAcagca‑g > 1:1980944/1‑90 (MQ=255) cACGAACATATGGCACGAAAAACCAAACAAGAAGCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCAcagca‑g > 2:1112742/1‑90 (MQ=255) cACGAACATATGGCACGAAAAACCAAACAAGAAGCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCAcagca‑g > 1:1794110/1‑90 (MQ=255) cACGAACATATGGCACGAAAAACCAAACAAGAAGCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCAcagca‑g > 1:1758951/1‑90 (MQ=255) aCGAACATATGGCACGAAAAACCAAACAAGAAGCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCA‑gg < 2:2181008/90‑1 (MQ=255) aCGAACATATGGCACGAAAAACCAAACAAGAAGCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCA‑gg < 1:342974/90‑1 (MQ=255) aCGAACATATGGCACGAAAAACCAAACAAGAAGCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCA‑gg < 1:136482/90‑1 (MQ=255) gaaccATATGGCGCCAAGAACAAAACCAGTAGCACAAGCGAGGCGCCACCACATCCTCGTTGTGGCGCTACATCTTTTCTCACAGCA‑ggg < 2:327245/86‑1 (MQ=255) cGAACATATGGCACGAAAAACCAAACAAGAAGCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCA‑ggg < 2:54236/90‑1 (MQ=255) gAACATATGGCACGAAAAACCAAACAAGAAGCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCA‑gggg < 1:1176231/90‑1 (MQ=255) aCATATGGCACGAAAAACCAAACAAGAAGCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCA‑gggg‑gg < 1:654412/90‑2 (MQ=255) atatGGCACGAAAAACCAAACAAGAAGCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCA‑gggg‑ggta < 2:3149263/90‑4 (MQ=255) atatGGCACGAAAAACCAAACAAGAAGCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCA‑gggg‑ggta < 1:673916/90‑4 (MQ=255) tatGGCACGAAAAACCAAACAAGAAGCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCA‑gggg‑ggtat > 1:238635/1‑86 (MQ=255) tatGGCACGAAAAACCAAACAAGAAGCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCA‑gggg‑ggtat > 1:2348017/1‑86 (MQ=255) tGGCACGAAAAACCAAACAAGAAGCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTatca < 2:1720525/90‑1 (MQ=255) gCACGAAAAACCAAACAAGAAGCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTatcatc < 2:1822638/90‑1 (MQ=255) gCACGAAAAACCAAACAAGAAGCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTatcatc < 1:1938739/90‑1 (MQ=255) cACGAAAAACCAAACAAGAAGCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATcc > 1:2706736/1‑90 (MQ=255) aCGAAAAACCAAACAAGAAGCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCa > 2:1208524/1‑90 (MQ=255) aCGAAAAACCAAACAAGAAGCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCa > 1:191922/1‑90 (MQ=255) aCGAAAAACCAAACAAGAAGCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GGATCATCCa > 2:2718456/1‑90 (MQ=255) aCGAAAAACCAAACAAGAAGCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCA‑gggg < 2:1670190/79‑1 (MQ=255) aCGAAAAACCAAACAAGAAGCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCA‑gggg > 1:1670190/1‑79 (MQ=255) cGAAAAACCAAACAAGAAGCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCAc < 2:2752927/90‑1 (MQ=255) cGAAAAACCAAACAAGAAGCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCA‑GGGGTGTATCATCCAc > 2:2988902/1‑90 (MQ=255) gAAAAACCAAACAAGAAGCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCAcc < 2:2110499/90‑1 (MQ=255) gAAAAACCAAACAAGAAGCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCAcc > 2:2964674/1‑90 (MQ=255) gAAAAACCAAACAAGAAGCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCAcc > 2:843086/1‑90 (MQ=255) agaagCGCAAGAAACGCGCCAACACCTCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCgaga < 1:839554/90‑1 (MQ=255) agaagCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCgaga < 2:2598010/90‑1 (MQ=255) agaagCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCgaga < 1:1011610/90‑1 (MQ=255) gcAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCaa > 1:2270270/1‑90 (MQ=255) aaGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCaaaa > 2:1903883/1‑90 (MQ=255) aCGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAagcagc < 1:1059790/90‑1 (MQ=255) aCGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAagcagc < 2:1082792/90‑1 (MQ=255) aCGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAagcagc < 1:2903941/90‑1 (MQ=255) aaCACATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCg < 1:51239/67‑1 (MQ=255) aaCACATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCg > 2:51239/1‑67 (MQ=255) acacATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTa < 1:75470/90‑1 (MQ=255) caTCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTAcgc > 2:221270/1‑90 (MQ=255) caTCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTAcgc < 2:666317/90‑1 (MQ=255) tCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACTTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTAcgcgc < 1:1947790/90‑1 (MQ=255) tCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTAcgcgc < 1:2304570/90‑1 (MQ=255) tCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTAcgcgc > 1:2566212/1‑90 (MQ=255) tCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTAcgcgc > 1:1760786/1‑90 (MQ=255) tCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTAcgcgc < 2:2156108/90‑1 (MQ=255) tCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTAcgcgc < 1:2964674/90‑1 (MQ=255) tCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTAcgcgc < 2:1758951/90‑1 (MQ=255) tCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTAcgcgc > 1:298001/1‑90 (MQ=255) tCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTAcgcgc < 2:1405867/90‑1 (MQ=255) tCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTAcgcgc < 1:313279/90‑1 (MQ=255) tCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTAcgcgc > 1:479545/1‑90 (MQ=255) tCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTAcgcgc < 1:2139340/90‑1 (MQ=255) tCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTAcgcgc < 1:959903/90‑1 (MQ=255) cTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCgg < 1:1290026/90‑1 (MQ=255) cTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCgg < 2:3344163/90‑1 (MQ=255) cTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GGATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCgg > 2:2221968/1‑90 (MQ=255) gATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGc < 1:1871227/90‑1 (MQ=255) gATGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGc < 2:845941/90‑1 (MQ=255) aTGTGGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCa < 2:842236/90‑1 (MQ=255) tgtgGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCaa < 2:881744/90‑1 (MQ=255) gtgGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAAt > 2:1073654/1‑90 (MQ=255) gtgGCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCGGGCGTTACGCGCGGTGCAAt > 2:3203991/1‑90 (MQ=255) ggCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGGGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCt > 2:2721751/1‑90 (MQ=255) ggCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCt > 2:7859/1‑90 (MQ=255) ggCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCt > 2:2650260/1‑90 (MQ=255) ggCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCt > 1:3202301/1‑90 (MQ=255) ggCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCt > 2:1596304/1‑90 (MQ=255) gCTCTACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCTa > 1:580109/1‑90 (MQ=255) ctctACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCTAc > 2:2716214/1‑90 (MQ=255) ctctACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCTAc < 2:644985/90‑1 (MQ=255) ctctACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCTAc < 2:3256633/90‑1 (MQ=255) tctACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCTACt > 2:2202676/1‑90 (MQ=255) ctACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCTACTg < 2:2867373/90‑1 (MQ=255) ctACGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCTACTg > 1:167319/1‑90 (MQ=255) aCGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCTACTGGc > 1:1528057/1‑90 (MQ=255) cGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCTACTGGCa < 2:382706/90‑1 (MQ=255) cGTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCTACTGGCa < 1:1480406/90‑1 (MQ=255) gTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCTACTGGCa > 2:654958/1‑89 (MQ=255) gTCTTTTCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCTACTGGCa < 1:654958/89‑1 (MQ=255) tttCTCACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCTACTGGCATTTTa > 2:114297/1‑90 (MQ=255) ctcACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCTACTGGCATTTTAAAg < 1:3070130/90‑1 (MQ=255) ctcACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCTACTGGCATTTTAAAg < 2:2911833/90‑1 (MQ=255) tcACAGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCTACTGGCATTTTAAAGa > 2:1764235/1‑90 (MQ=255) tcACAGCAGGGGG‑GGATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCTACTGGCATTTTAAAGa > 1:2692059/1‑90 (MQ=255) cacaGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCTACTGGCATTTTAAAGAc < 2:3029913/90‑1 (MQ=255) cacaGCAGGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCTACTGGCATTTTAAAGAc < 1:2556538/90‑1 (MQ=255) cagcagGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCTACTGGCATTTTAAAGACaa > 1:2690707/1‑90 (MQ=255) cagcagGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCTACTGGCATTTTAAAGACaa > 1:1258949/1‑90 (MQ=255) cagcagGGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCTACTGGCATTTTAAAGACaa > 1:887542/1‑90 (MQ=255) | TCACGAACATATGGCACGAAAAACCAAACAAGAAGCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCA‑GGGG‑GTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCTACTGGCATTTTAAAGACAA > NZ_CP009273/481207‑481380 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |