| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | 281585 = | 127 (1.080) | 8 (0.070) | 8/154 | 4.0 | 6.4% | coding (480/1383 nt) | yagG | MFS transporter |
| ? | NZ_CP009273 | 281607 = | 119 (1.110) | coding (502/1383 nt) | yagG | MFS transporter | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ACGCCGCTCAGCCCCAGCACGCACATGGCGCCGAAGTAGCCCACCTGCTCGTCCCCTTTGCCGATGATGCTCACCAGCGGCAGCGCGATGCCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NZ_CP009273/281680‑281585‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccgctgGTGAGCATCATCGGCAAAGGGGACGAGCAGGTGGGCTACTTCGGCGCCATGTGCGTGCTGGGGCTGAGCGGCGTGGTGCTGCTC > NZ_CP009273/281607‑281690 ACGCCGCTCAGCCCCAGCACGCACATGGCGCCGAAGTAGCCCACCTGCTCGTCCCCTTTGCCGATGATGCTCACCAGCGGCAGCGCGATG > 1:1304558/1‑90ACGCCGCTCAGCCCCAGCACGCACATGGCGCCGAAGTAGCCCACCTGCTCGTCCCCTTTGCCGATGATGCTCACCAGCGGCAGCGCGATG > 2:2708873/1‑90ACGCCGCTCAGCCCCAGCACGCACATGGCGCCGAAGTAGCCCACCTGCTCGTCCCCTTTGCCGATGATGCTCACCAGCGGCAGCGCGATG > 2:1798147/1‑90ACGCCGCTCAGCCCCAGCACGCACATGGCGCCGAAGTAGCCCACCTGCTCGTCCCCTTTGCCGATGATGCTCACCAGCGGCAGCGCGATG > 2:1099007/1‑90ACGCCGCTCAGCCCCAGCACGCACATGGCGCCGAAGTAGCCCACCTGCTCGTCCCCTTTGCCGATGATGCTCACCAGCGGCAGCGCGATG > 2:1043437/1‑90ACGCCGCTCAGCCCCAGCACGCACATGGCGCCGAAGTAGCCCACCTGCTCGTCCCCTTTGCCGATGATGCTCACCAGCGGCAGCGCGATG > 1:940577/1‑90ACGCCGCTCAGCCCCAGCACGCACATGGCGCCGAAGTAGCCCACCTGCTCGTCCCCTTTGCCGATGATGCTCACCAGCGGCAGCGCGATG > 1:937217/1‑90ACGCCGCTCAGCCCCAGCACGCACATGGCGCCGAAGTAGCCCACCTGCTCGTCCCCTTTGCCGATGATGCTCACCAGCGGCAGCGCGATG > 1:505298/1‑90ACGCCGCTCAGCCCCAGCACGCACATGGCGCCGAAGTAGCCCACCTGCTCGTCCCCTTTGCCGATGATGCTCACCAGCGGCAGCGCGATG < 1:294861/90‑1ACGCCGCTCAGCCCCAGCACGCACATGGCGCCGAAGTAGCCCACCTGCTCGTCCCCTTTGCCGATGATGCTCACCAGCGGCAGCGCGATG > 1:1360459/1‑90ACGCCGCTCAGCCCCAGCACGCACATGGCGCCGAAGTAGCCCACCTGCTCGTCCCCTTTGCCGATGATGCTCACCAGCGGCAGCGCGATG < 1:241844/90‑1ACGCCGCTCAGCCCCAGCACGCACATGGCGCCGAAGTAGCCCACCTGCTCGTCCCCTTTGCCGATGATGCTCACCAGCGGCAGCGCGATG > 1:1983911/1‑90ACGCCGCTCAGCCCCAGCACGCACATGGCGCCGAAGTAGCCCACCTGCTCGTCCCCTTTGCCGATGATGCTCACCAGCGGCAGCGCGATG > 1:2948443/1‑90ACGCCGCTCAGCCCCAGCACGCACATGGCGACGAAGTAGCCCACCTGCTCGTCCCCTTTGCCGATGATGCTCACCAGCGGCAGCGCGATG > 2:1487030/1‑90 CGCCGCTCAGCCCCAGCACGCACATGGCGACGAAGTAGCCCACCTGCTCGTCCCCTTTGCCGATGATGCTCACCAGCGGCAGCGCGATGC < 2:193108/90‑1 GCCGCTCAGCCCCAGCACGCACATGGCGCCGAAGTAGCCCACCTGCTCGTCCCCTTTGCCGATGATGCTCACCAGCGGCAGCGCGATGCC < 2:3191679/90‑1 CGCTCAGCCCCAGCACGCACATGGCGCCGAAGTAGCCCACCTGCTCGTCCCCTTTGCCGATGATGCTCACCAGCGGCAGCGCGATGCCGC < 1:2956442/90‑1 GCTCAGCCCCAGCACGCACATGGCGCCGAAGTAGCCCACCTGCTCGTCCCCTTTGCCGATGATGCTCACCAGCGGCAGCGCGATGCCGCT > 2:1106362/1‑90 GCTCAGCCCCAGCACGCACATGGCGCCGAAGTAGCCCACCTGCTCGTCCCCTTTGCCGATGATGCTCACCAGCGGCAGCGCGATGCCGCT < 2:1334336/90‑1 GCTCAGCCCCAGCACGCACATGGCGCCGAAGTAGCCCACCTGCTCGTCCCCTTTGCCGATGATGCTCACCAGCGGCAGCGCGATGCCGCT > 2:1965058/1‑90 GCTCAGCCCCAGCACGCACATGGCGCCGAAGTAGCCCACCTGCTCGTCCCCTTTGCCGATGATGCTCACCAGCGGCAGCGCGATGCCGCT > 1:245704/1‑90 CTCAGCCCCAGCACGCACATGGCGCCGAAGTAGCCCACCTGCTCGTCCCCTTTGCCGATGATGCTCACCAGCGGCAGCGCGATGCCGCTG > 2:1841031/1‑90 cCAGCCCCAGCACGCACATGGCGCCGAAGTAGCCCCCCTGCTCGTCCCCTTTGCCGATGATGCTCACCAGCGGCAGCGCGATGCCGCTGG < 2:1141999/89‑1 AGCACGCACATGGCGCCGAAGTAGCCCACCTGCTCGTCCCCTTTGCCGATGATGCTCCCCAGCGGCAGCGCGATGCCGCTGGTGAGCATC < 2:1567231/90‑1 CATGGCGCCGAAGTAGCCCACCTGCTCGT‑CCCTTTGCCGATGATGATCACCAGCGGCAGCGCGATGCCGCTGGTGAGCATCATCGGCAAA < 1:1900312/90‑1 CGCCGAAGTAGCCCACCTGCTCGTCCCCTTTGCCGATGATGCTCACCAGCGGCAGCGCGATGCCGCTGGTGAGCATCATCGGCAAAGGGG < 2:1434309/90‑1 GCCGAAGTAGCCCACCTGCTCGTCCCCTTTGCCGATGATGCTCACCAGCGGCAGCGCGATGCCGCTGGTGAGCATCATCGGCAAAGGGGA < 2:1641657/90‑1 AGCCCACCTGCTCGTCCCCTTTGCCGATGATGCTCACCAGCGGCAGCGCGATGCCGCTGGTGAGCATCATCGGCAAAGGGGACGAGCAGG < 2:940577/90‑1 GCCCACCTGCTCGTCCCCTTTGCCGATGATGCTCACCAGCGGCAGCGCGATGCCGCTGGTGAGCATCATCGGCAAAGGGGACGAGCAGGT < 1:688202/90‑1 GATGATGCTCGCCAGCGGCAGCGCGATGCCGCTGGTGAGCATCATCGGCAAAGGGGACGAGCAGGTGGGCTACTTCGGCGCCATGTGCGT < 2:2097072/90‑1 GCCGCTGGTGAGCATCATCGGCAAAGGGGACGAGCAGGTGGGCTACTTCGGCGCCATGTGCGTGCTGGGGCTGAGCGGCGTGGTGCTGCT < 1:2155334/90‑1 CCGCTGGTGAGCATCATCGGCAAAGGGGACGAGCAGGTGGGCTACTTCGGCGCCATGTGCGTGCTGGGGCTGAGCGGCGTGGTGCTGCTC < 1:1121338/90‑1 ACGCCGCTCAGCCCCAGCACGCACATGGCGCCGAAGTAGCCCACCTGCTCGTCCCCTTTGCCGATGATGCTCACCAGCGGCAGCGCGATGCCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NZ_CP009273/281680‑281585‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccgctgGTGAGCATCATCGGCAAAGGGGACGAGCAGGTGGGCTACTTCGGCGCCATGTGCGTGCTGGGGCTGAGCGGCGTGGTGCTGCTC > NZ_CP009273/281607‑281690 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |