| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | 360104 = | NA (NA) | 173 (1.470) | 58/170 | 0.2 | NA | intergenic (‑35/+251) | lacZ/BW25113_RS23320 | beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein |
| ? | NZ_CP009273 | = 360286 | NA (NA) | intergenic (‑217/+69) | lacZ/BW25113_RS23320 | beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein | |||||
Only 100 of 155 total aligned reads displayed.
ACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGATTTGTCC > NZ_CP009273/360016‑360193 | ccGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAAt > 1:2613008/1‑90 (MQ=255) cGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAAtt > 2:2559274/1‑90 (MQ=255) cGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAAtt > 1:572000/1‑90 (MQ=255) tGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTg > 1:1900846/1‑90 (MQ=255) tGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTg > 2:344174/1‑90 (MQ=255) tGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTg > 2:2280890/1‑90 (MQ=255) tGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTg > 2:207509/1‑90 (MQ=255) gCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTgg < 1:1303492/90‑1 (MQ=255) ccAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGc < 1:2590179/90‑1 (MQ=255) ccAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGc < 1:344174/90‑1 (MQ=255) gCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGt > 1:2297157/1‑90 (MQ=255) gCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGt > 1:101665/1‑90 (MQ=255) gCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTa > 1:957853/1‑90 (MQ=255) ttACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATg < 2:845148/90‑1 (MQ=255) ccAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcgggcg > 2:731259/1‑90 (MQ=255) cAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcgggggg > 2:2509092/1‑87 (MQ=255) cAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcgggggg > 1:2505965/1‑87 (MQ=255) cAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGt > 2:2247712/1‑90 (MQ=255) tCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCa < 1:2728112/90‑1 (MQ=255) tCCAGTGCAGGAGCTCCGATGATAAGCCGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCa < 1:2809215/90‑1 (MQ=255) tCCAGTGAAGGAGCGCCGATGATCCGCTGTCCAACATGAGAATGCCGGTCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGccg < 2:894334/90‑2 (MQ=25) aGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCAccc < 1:751726/90‑1 (MQ=255) aGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGGCCCGGCcccccccc > 2:1049930/1‑90 (MQ=255) aGTGCAGGAGATCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCAccc < 1:2352692/90‑1 (MQ=255) tGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTc < 2:2695307/90‑1 (MQ=255) gCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTcc < 1:989551/90‑1 (MQ=255) gCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGGGCCGCcccccccccccc > 2:531878/1‑90 (MQ=255) aGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCgg < 1:2160648/90‑1 (MQ=255) ggAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTgg < 1:1962503/53‑1 (MQ=255) ggAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGGCCTGCCCCCCCCCCCCCcgg > 1:2266120/1‑90 (MQ=38) ggAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGCCGCGCTccccccccccccccccg > 2:109524/1‑87 (MQ=255) aGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGcc < 2:2855768/90‑1 (MQ=255) aGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGcc < 2:2044460/90‑1 (MQ=255) tCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGGCCTGCCCCCCCCCCCCCCCGCCGtt > 1:3376843/1‑90 (MQ=37) tCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCAGGGGTCCTCCCCGCCCCCCCCCGGGCCgat > 1:1397564/1‑88 (MQ=37) ccGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTg < 1:2893015/90‑1 (MQ=255) aaGCTGTCAACCATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑aa < 1:1774259/90‑1 (MQ=255) aaGCTGTCAAACATGAGAATTCCGACCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑aa < 2:311191/90‑1 (MQ=255) aGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AAc < 2:1631231/90‑1 (MQ=255) tGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGGGGCCCCCCCCCCCCCCCCCCGGCCCGGGCTTCG‑C‑AACAtt > 1:813859/1‑90 (MQ=19) gTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATg < 2:1599334/43‑1 (MQ=255) gTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATg > 1:1599334/1‑43 (MQ=255) gTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGGGGCCCCCCCCCCCCCCCCCCCGCCGGTGCTTTC‑C‑CACGTTc > 1:1018175/1‑90 (MQ=255) gTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGGCCTGCCCCCCCCCCCCCCGGCCGGTGGTTCG‑C‑AACGTTc > 1:124884/1‑90 (MQ=21) gTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGGCCCGCCCCCCCCCCCCCCGGCCGGTGCTTTG‑G‑AACGTTc > 1:3213809/1‑90 (MQ=21) tCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCa < 2:443497/90‑1 (MQ=255) cAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCaa < 2:2613008/90‑1 (MQ=255) cAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGGCCCGCCCCCCCCCCCCCCCGCCGGTGCTTTT‑C‑CACGTTCaa > 1:923412/1‑90 (MQ=21) aCATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATc < 1:2063550/90‑1 (MQ=255) aTGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGGGTCCt > 1:2774438/1‑47 (MQ=255) aTGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCt < 2:2774438/47‑1 (MQ=255) tGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGc < 1:2870796/90‑1 (MQ=255) tGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGGCCTGCCCCCCCCCCCCCCGGCCGGTGCTTCG‑C‑AAAGTTCAAAAcccc > 1:1199081/1‑88 (MQ=18) ttCCGATCCCCAATTCCTGGCAGTTTATGGCGGGGGGCCCGCCCCCCCCCCCCCCCGCCGGTGCGTCG‑C‑CACGTTCAAATcccccccccg > 2:3163446/1‑88 (MQ=12) ttCCGATCCCCAATTCCTGGCAGTTTATGGCGGGGGGCCCGCCCCCCCCCCCCCCCGCCCGTGCTTTGCC‑AAGGTCCAAATccccccccc > 2:502646/1‑89 (MQ=255) ttCCGAT‑CCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCcggc < 1:2541831/90‑1 (MQ=255) tCCGATCCCCAATTCCTGGCAGTTTATGGCGGGGGGCCCGCCCCCCCCCCCCCCGGCCGGTGCTTTG‑C‑AACGTTCAAAACCGCTCCcggc > 1:2427706/1‑90 (MQ=17) tCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCcggc < 1:2247712/90‑1 (MQ=255) gATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGa < 1:1715281/90‑1 (MQ=255) gATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGa < 2:855676/90‑1 (MQ=255) tcaccAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGAtt < 1:2090401/87‑1 (MQ=255) tCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCCCCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGAtt < 2:418611/90‑1 (MQ=255) tCCCCAATCCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGAtt < 1:3223392/90‑1 (MQ=255) aattaaTTCCTGGCAGTTTATGGCGGGGGGCCTTCCCCCCCCCCCCCCGGCCCGTGGTTTG‑CAAACTTTCAAATCCCCCCCCGCCGGGtt > 1:121512/5‑90 (MQ=2) ccAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGATTTGt < 2:635311/90‑1 (MQ=38) ccAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGATTTGt < 2:603516/90‑1 (MQ=38) aaTTCCTGGCGGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:109524/90‑1 (MQ=25) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCCCCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:1192152/90‑1 (MQ=25) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCCCCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:3098471/90‑1 (MQ=25) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCCCCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:814495/90‑1 (MQ=25) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCCCCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:3284622/90‑1 (MQ=25) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCCCCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:3314358/90‑1 (MQ=25) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCCCCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:212898/90‑1 (MQ=25) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:2139869/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:2080134/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:2174397/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:2050988/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:2686679/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:1106341/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:1729962/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:2770090/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:303082/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:3057483/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:3148522/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:43875/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:3166256/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:391305/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:1574891/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:1003920/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:3213809/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:1156275/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:206601/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:2784345/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:1861499/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:1972086/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:1514725/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:1252355/90‑1 (MQ=35) aaTTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGACACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 1:1637212/90‑1 (MQ=25) aaTTCCTGGCAGTTTATGGCGGGCGCCCTGCCCGCCCCCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:185932/90‑1 (MQ=255) aaTTCCTGGCAGTTTATGGCAGGCGTCCTGCCCGCCACCCCCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGATTTGTcc < 2:1397564/90‑1 (MQ=255) | ACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑C‑AACGTTCAAATCCGCTCCCGGCGGATTTGTCC > NZ_CP009273/360016‑360193 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |